BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030A12LP1|AL429158
(1008 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1085 1444 0.0
>3x_Contig1085
Length = 5008
Score = 1444 bits (725), Expect = 0.0
Identities = 734/741 (99%)
Strand = Plus / Minus
Query: 5 acgtaataggaggtaggtgattdacgatgatggcggaggggtatgcacttgtctttttgg 64
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 743 acgtaataggaggtaggtgatttacgatgatggcggaggggtatgcacttgtctttttgg 684
Query: 65 agaagaaggtcgcgaaggaacgaatgatttgtatatmagtaaggghtcgcmgatmtgttt 124
||||||||||||||||||| |||||||||||||||| |||||||| |||| ||| |||||
Sbjct: 683 agaagaaggtcgcgaaggaccgaatgatttgtatatcagtaagggctcgccgatctgttt 624
Query: 125 atattccggtactttcagagttagattgaaagcttttgcaatcacgaccttaaatatttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 atattccggtactttcagagttagattgaaagcttttgcaatcacgaccttaaatatttt 564
Query: 185 ctgtacgttgattgatgattgggtcgagcaaaatatcagaggcgatttcataacttgagc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ctgtacgttgattgatgattgggtcgagcaaaatatcagaggcgatttcataacttgagc 504
Query: 245 gtatttmatcgcagttctagatacattttcttgatattcggggtccatatcgacgaaaag 304
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gtatttcatcgcagttctagatacattttcttgatattcggggtccatatcgacgaaaag 444
Query: 305 gtcatatttagttccaaccagaattgaaattgctgtatcattgaacccccttgcttgtct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gtcatatttagttccaaccagaattgaaattgctgtatcattgaacccccttgcttgtct 384
Query: 365 gtaccattcttttatcgaatttaaagtctctggccgcgtcaaatcgaaaagaaatactat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gtaccattcttttatcgaatttaaagtctctggccgcgtcaaatcgaaaagaaatactat 324
Query: 425 tgcaactgcaccttcggatactaaagggagcatattgataaattcacgttgacctccaag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tgcaactgcaccttcggatactaaagggagcatattgataaattcacgttgacctccaag 264
Query: 485 atccattatggagaatataacgtctgtggatcccagcaccactttccgctcgaggtaatg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 atccattatggagaatataacgtctgtggatcccagcaccactttccgctcgaggtaatg 204
Query: 545 cacccccaatgtctgcgtatattcctcatcaaacacattttgtacgtatttgaccattaa 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 cacccccaatgtctgcgtatattcctcatcaaacacattttgtacgtatttgaccattaa 144
Query: 605 agaagtctttccaacttgtgcatcacctatcaggccaactttcaccttgacctggtgtct 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 agaagtctttccaacttgtgcatcacctatcaggccaactttcaccttgacctggtgtct 84
Query: 665 aaggctcggtactcgatctttatccagagacattgcaacgaaaaaaaaaagagtgttatc 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 aaggctcggtactcgatctttatccagagacattgcaacgaaaaaaaaaagagtgttatc 24
Query: 725 tgtagacttgtctcactgctc 745
|||||||||||||||||||||
Sbjct: 23 tgtagacttgtctcactgctc 3
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8142
Number of Sequences: 1807
Number of extensions: 8142
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 1
length of query: 1008
length of database: 10,358,551
effective HSP length: 16
effective length of query: 992
effective length of database: 10,329,639
effective search space: 10247001888
effective search space used: 10247001888
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)